Following the people and events that make up the research community at Duke

Students exploring the Innovation Co-Lab

Category: Students Page 8 of 41

LowCostomy: the Low-Cost Colostomy Bag for Africa

It’s common for a Pratt engineering student like me to be surrounded by incredible individuals who work hard on their revolutionary projects. I am always in awe when I speak to my peers about their designs and processes.

So, I couldn’t help but talk to sophomore Joanna Peng about her project: LowCostomy.

Rising from the EGR101 class during her freshman year, the project is about building  a low-cost colostomy bag — a device that collects excrement outside the patient after they’ve had their colon removed in surgery. Her device is intended for use in under-resourced Sub-Saharan Africa.

“The rates in colorectal cancer are rising in Africa, making this a global health issue,” Peng says. “This is a project to promote health care equality.”

The solution? Multiple plastic bags with recycled cloth and water bottles attached, and a beeswax buffer.

“We had to meet two criteria: it had to be low cost; our max being five cents. And the second criteria was that it had to be environmentally friendly. We decided to make this bag out of recycled materials,” Peng says. 

Prototype of the LowCostomy bag

For now, the team’s device has succeeded in all of their testing phases. From using their professor’s dog feces for odor testing, to running around Duke with the device wrapped around them for stability testing, the team now look forward to improving their device and testing procedures.

“We are now looking into clinical testing with the beeswax buffer to see whether or not it truly is comfortable and doesn’t cause other health problems,” Peng explains.

Poster with details of the team’s testing and procedures

Peng’s group have worked long hours on their design, which didn’t go unnoticed by the National Institutes of Health (NIH). Out of the five prizes they give to university students to continue their research, the NIH awarded Peng and her peers a $15,000 prize for cancer device building. She is planning to use the money on clinical testing to take a step closer to their goal of bringing their device to Africa.

Peng shows an example of the beeswax port buffer (above). The design team of Amy Guan, Alanna Manfredini, Joanna Peng, and Darienne Rogers (L-R).

“All of us are still fiercely passionate about this project, so I’m excited,” Peng says. “There have been very few teams that have gotten this far, so we are in this no-man’s land where we are on our own.”

She and her team continue with their research in their EGR102 class, working diligently so that their ideas can become a reality and help those in need.

Post by Camila Cordero, Class of 2025

Junior Alec Morlote Pursues a Love for Biology Via Fruit Flies

As Alec Morlote emphasizes, he’s a Biology major because “I’m really interested in it. I’d definitely be a Biology major whether I was pre-med or not.”

Morlote, a Trinity junior from northern New Jersey, works in the lab of Dr. Pelin Volkan studying the neurobiology of fruit flies. Why fruit flies, of all things? Well, Morlote initially signed up for a research fellowship program during the summer following his freshman year.

Of course, in March of that year, COVID-19 happened, so Morlote ended up postponing his work to this past summer. He got paired with the Volkan lab because he didn’t want to work in an area of research that was very familiar to him.

“I wanted to use research as an opportunity to learn something completely new,” he said. The neurobiology of fruit flies hit the nail on the head.

Alec Morlote

The Volkan Lab is a cell biology and neurobiology lab that studies how social behavior, specifically courting, is affected by stimuli, using fruit flies as a model organism. Morlote’s specific project has to do with olfactory stimuli – the things flies smell. In flies, as he explained, one gene is responsible for courtship behavior in male flies. If you take out the olfactory receptor of the fly, however, that gene won’t be active.

Morlote is interested in seeing how the olfactory receptor is critical to the expression of this gene.

To do this, he has been working on imaging the antennae of flies – work he describes as “cool, but tedious.” It’s incredibly detailed work to pick apart the antenna off of such a tiny creature.  Once isolated, neurotransmitters in the antenna that have been tagged with green fluorescent protein (GFP) light up, thus showing the expression pattern of all cells expressing the neurotransmitter.

Humans clearly don’t have as simplistic a courtship behavior as fruit flies, but the simplicity of the fruit fly makes it an incredibly valuable organism for studying neurobiology. All discoveries in humans initially started with some sort of watered-down version of the human anatomy, whether mice or in this case, fruit flies. Discoveries into the neurobiology and neuroplasticity of fruit flies just might yield significant discoveries into the neurobiology and neuroplasticity of the human brain.

When asked about his favorite and least favorite parts about his research, Morlote laughed.

“I don’t like doing work for three months and getting no results at all,” he remarked in reference to the initial work he started on this summer – but alas, such is the nature of scientific research. But he adds that the best part of research is getting results, any at all. And even no results can mean something.

Morlote’s poster from his summer research

Research was a way for Morlote to narrow his post-graduation plans. He knows now that he wants to pursue an MD, or possibly an MD/PhD. But initially, research was a way for him to see whether this was the path for him at all. When asked why he chose to be pre-med, Morlote said that “it just seemed like the most practical way to apply a love for science.” Biology is the science that he loves the most, and so being pre-med seemed like a no-brainer.

It’s also a family business. Both of Morlote’s parents are doctors, so medicine “is not unfamiliar territory to me.” Being Latin American, both his parents have worked extensively with Latin communities in New Jersey, which is work he hopes to emulate in the future.

Whether or not benchwork stays a part of his life, Morlote knows that he wants his career to involve research somehow. The way he sees it, “you’re doing the bare minimum if you’re just a doctor but you’re not trying to better medicine in some way.” 

Contributing to research just might become his way.

Post by Meghna Datta, Class of 2023

The Most Important 26 Hours of My First Term at Duke

As any first-year will tell you, the scramble for joining new clubs can be a daunting one. As the dust settled from the Involvement Fair, I looked at the fistful of flyers overflowing from my desk. One of these flyers stood out to me in particular: Student Collaborative on Health Policy (SCOHP). The program, backed by the Duke Margolis Center for Health Policy, seeks to educate, serve, and research within the Duke and Durham community regarding the social, economic, and political determinants of health care.

The Four Committees of SCOHP

Intrigued, I ventured to the Social Sciences building the following Sunday afternoon for their inaugural GBM. The event was lively, filled with a dizzying number of avenues for involvement. One such avenue that was the SCOHP-organized Health Policy Case Competition, advertised as a two-day team sprint to develop and pitch solutions to a pressing health care problem. The prizes were handsome: $1,000 for 1st place, $500 for 2nd place, and $250 for 3rd place, courtesy of the Margolis Center and RTI International. Furthermore, participants would be given access to mentors and industry leaders with vast experience in the area of public health.

Six teams, each consisting of three to five members, participated in the case-writing festivities. On Friday, September 10 at 5:00 PM, the case document was released. Our task: to develop a five-year plan aimed at increasing the screening for human papillomavirus (HPV) in either Malawi, South Africa, or Eswatini via a novel imaging technology known as microbeads. A considerably complex task given the vast number of social, institutional, and political barriers lying between the new technology and the women who needed it the most, not to mention the potential for HPV developing into cervical cancer if left undetected and untreated.

The Case Competition Title Document

Our team, Team J, assumed the role of a local NGO partnering with the Eswatini government. The preliminary hours of the competition were spent sifting through a sea of research. We read reviews of tissue imaging technology, feasibility studies on drug distribution networks, and mathematical projections of healthcare costs. At once invigorating and ceaselessly frustrating, the process of developing a comprehensive solution required significant mental and physical rearrangement. The nine hours following the release of the case were spent in a variety of popular campus study spots, from Bostock to Rubenstein Library, The Coffeehouse to dorm common rooms. In the early morning hours, our plan had finally begun to take shape.

A meager five hours of rest separated Day One of the competition from Day Two. After a night of brainstorming and research, we were left with three hours to finalize our five-minute proposals before a hard 12:00 PM deadline. As the deadline approached, we changed into our best attire from the clavicle up (the marvels of Zoom) and sat down. For the next hour and change, ideas flowed thickly and quickly; eager and persuasive tones emanating from our screens, tense silence as the judges moved into breakout rooms for deliberation.

The top three teams, Team J included, were selected for a final presentation round. The guidelines for this round: strengthen the argument, lengthen the presentation. We were in the final stretch. What followed was two hours of remarkably focused work, the likes of which I had never experienced in a team setting. As we sat down for the deciding presentation of the competition, I felt an immense sense of pride, not only in our solution, but also in our twenty-six hour transformations from perplexed receivers to confident presenters. This confidence and breadth of knowledge was visible in all three teams over the course of their fifteen-minute presentations and subsequent five-minute Q&A’s.

Team J’s Final Round Presentation Over Zoom

As the clock struck 7:00 PM on Saturday, September 11, the judges had submitted their verdict, at which point the teams turned towards the screen with rapt attention. The SCOHP organizers began reading the final standings. In what was described as an extremely close decision for the judges, Team J ended up winning first place. Battling the equally powerful forces of disbelief and sleep deprivation, we let out a collective breath. It was all over.

At the time of the competition, I had yet to complete a month at Duke. I didn’t know it then, but those twenty-six hours would end up being some of the most impactful in my first semester. The competition offered an entirely different approach to learning, one that was grounded in interdisciplinary inquiry and effective collaboration. And to think–it all started with a flyer buried underneath many other flyers.

Post by Vibhav Nandagiri, Class of 2025

Decentralized Finance and the Power of Smart Contracts

When people use apps or services like Netflix, Instagram, Amazon, etc. they sign, or rather virtually accept, digital user agreements. Digital agreements have been around since the 1990s. These agreements are written and enforced by the institutions that create these services and products. However, in certain conditions, these systems fail and these digital or service-level agreements can be breached, causing people to feel robbed. 

A recent example of this is the Robinhood scandal that occurred in mid-2021. Essentially, people came together and all wanted to buy the same stock. However, Robinhood ended up restricting buying, citing issues with volatile stock and regulatory agreements. As a result, they ended up paying $70 million dollars in fines for system outages and misleading customers. And individual customers were left feeling robbed. This was partially the result of centralization and Robinhood having full control over the platform as well as enforcing the digital agreement.

Zak Ayesh Presenting on Chainlink
and Decentralized Smart Contracts

Zak Ayesh, a developer advocate at Chainlink recently came to Duke to talk about decentralized Smart Contracts that could solve many of the problems with current centralized digital agreements and traditional paper contracts as well. 

What makes smart contracts unique is that they programmatically implement a series of if-then rules without the need for a third-party human interaction. While currently these are primarily being used on blockchains, they were actually created by computer scientist Nick Szabo in 1994. Most smart contracts now run on blockchains because it allows them to remain decentralized and transparent. If unfamiliar with blockchain refer to my previous article here. 

Smart contracts are self-executing contracts with the terms of the agreement being directly written into computer code.

Zak Ayesh

There are several benefits to decentralized contracts. The first is transparency. Because every action on a blockchain is recorded and publicly available, the enforcement of smart contracts is unavoidably built-in. Next is trust minimization and guaranteed execution. With smart contracts, there is reduced counterparty risk — that’s the probability one party involved in a transaction or agreement might default on its contractual obligation because neither party has control of the agreement’s execution or enforcement. Lastly, they are more efficient due to automation. Operating on blockchains allows for cheaper and more frictionless transactions than traditional alternatives. For instance, the complexities of cross-border remittances involving multiple jurisdictions and sets of legal compliances can be simplified through coded automation in smart contracts.

Dr. Campbell Harvey, a J. Paul Sticht Professor of International Business at Fuqua, has done considerable research on smart contracts as well, culminating in the publication of a book, DeFi and the Future of Finance which was released in the fall of 2021.

In the book, Dr. Harvey explores the role smart contracts play in decentralized finance and how Ethereum and other smart contract platforms give rise to the ability for decentralized application or dApp. Additionally, smart contracts can only exist as long as the chain or platform they live on exists. However, because these platforms are decentralized, they remove the need for a third party to mediate the agreement. Harvey quickly realized how beneficial this could be in finance, specifically decentralized finance or DeFi where third-party companies, like banks, mediate agreements at a high price.  

“Because it costs no more at an organization level to provide services to a customer with $100 or $100 million in assets, DeFi proponents believe that all meaningful financial infrastructure will be replaced by smart contracts which can provide more value to a larger group of users,” Harvey explains in the book

Beyond improving efficiency, this also creates greater accessibility to financial services. Smart contracts provide a foundation for DeFi by eliminating the middleman through publicly traceable coded agreements. However, the transition will not be completely seamless and Harvey also investigates the risks associated with smart contracts and advancements that need to be made for them to be fully scalable.

Ultimately, there is a smart contract connectivity problem. Essentially, smart contracts are unable to connect with external systems, data feeds, application programming interfaces (APIs), existing payment systems, or any other off-chain resource on their own. This is something called the Oracle Problem which Chainlink is looking to solve.

Harvey explains that when a smart contract is facilitating an exchange between two tokens, it determines the price by comparing exchange rates with another similar contract on the same chain. The other smart contract is therefore acting as a price oracle, meaning it is providing external price information. However, there are many opportunities to exploit this such as purchasing large amounts on one oracle exchange in order to alter the price and then go on to purchase even more on a different exchange in the opposite direction. This allows for capitalization on price movement by manipulating the information the oracle communicates to other smart contracts or exchanges. 

That being said, smart contracts are being used heavily, and Pratt senior Manmit Singh has been developing them since his freshman year along with some of his peers in the Duke Blockchain Lab. One of his most exciting projects involved developing smart contracts for cryptocurrency-based energy trading on the Ethereum Virtual Machine allowing for a more seamless way to develop energy units.

One example of how this could be used outside of the crypto world is insurance. Currently, when people get into a car accident it takes months or even a year to evaluate the accident and release compensation. In the future, there could be sensors placed on cars connected to smart contracts that immediately evaluate the damage and payout.

Decentralization allows us to avoid using intermediaries and simply connect people to people or people to information as opposed to first connecting people to institutions that can then connect them to something else. This also allows for fault tolerance: if one blockchain goes down, the entire system does not go down with it. Additionally, because there is no central source controlling the system, it is very difficult to gain control of thus protecting against attack resistance and collusion resistance. While risks like the oracle problem need to be further explored, the world and importance of DeFi, as well as smart contracts, is only growing.

And as Ayesh put it, “This is the future.”

Post by Anna Gotskind, Class of 2022

Science Behind the Scenes: Get To Know a Zebrafish Lab Technician

It’s 7:30 a.m. on a Sunday morning, and Mark McDonough is making a very familiar journey through a very unfamiliar mode. With the light rain pelting down on his gelled hair, he’s walking the 2-mile trek from East Campus to West Campus. The C1 doesn’t run until 8:30 a.m. on weekends, and his job is simply too important to wait for Duke-provided transportation.

Since his third week as a freshman, Mark has held the position of Lab Technician at the Duke University School of Medicine Zebrafish Core Facilities. Through the job, which he earned via the university’s work-study program, Mark has had the opportunity to make his college experience more affordable while completing the behind-the-scenes work that keeps the university’s labs running.

Upon arriving at work every morning, Mark spends anywhere from thirty minutes to an hour cleaning the filters on the fish tanks, after which he removes feces and inserts food. These three tasks are just a microcosm of his duties as a lab technician, but without them, a majority of his assigned fish would die before their biological characteristics could be fully measured.

As a freshman, Mark McDonough (pictured) has had the opportunity to work in a lab that does cutting-edge research.

Mark’s day-to-day responsibilities are similar to those of many lab technicians. Hundreds of Duke’s affiliated research labs make use of living subjects and biological specimens which must be sheltered, fed, and closely monitored. Without the presence of lab technicians, studies involving these subjects could lead to inconsequential or misleading results.

Mark’s supervisor, Z-Core Facilities Manager Karina Olivieri, fully understands the importance of the three lab technicians in her five zebrafish facilities. Says Olivieri, technicians ensure the “health of the fish and quality of their water so that researchers can collect measurements and make valuable insights.” As the demand for zebrafish grows on Duke’s campus, she expects the number of lab technician roles to grow as well. This trend will likely not be unique to Duke.

The zebrafish’s see-through embryo, rapid life cycle, and well-documented genome make it a “model organism” for biological experiments.

Nationwide, demand for lab technicians has accelerated in many of the largest research corporations and academic institutions. According to the Foundation for Biomedical Research, almost every U.S. drug must pass through animal testing in order to reach FDA approval, meaning that larger amounts of living specimens must be preserved as the pharmaceutical industry grows. The rising presence of these experimental subjects may be why the Bureau of Labor Statistics reports that lab technician roles are increasing at a rate of 11%, which beats the national average for STEM occupations.

Though lab technicians don’t present work at prestigious conferences or see their names printed at the top of cutting-edge research articles, their work is pivotal for ensuring that innovative research can be conducted at Duke and beyond. So in the unlikely event that you recognize a passing stranger as a lab technician, make sure to thank them for their service to the Duke community. They keep the university’s vibrant research scene – and its fish – thriving.

Post by Shariar Vaez-Ghaemi, class of 2025

What Happens When You Give People Money?

What happens when you give people money? Dr. Aisha Nyandoro and Natalie Foster know: through their research, they’ve seen the impacts of guaranteed income firsthand.

On November 9, as part of the Duke Center for Child and Family Policy’s Sulzberger Distinguished Lecture series, these experts discussed their work and what we can learn from it at “What Happens When You Give People Money: The Future of Economic Security for Children and Families.”

Natalie Foster

Foster, co-founder and co-chair of the Economic Security Project, began with the big idea of guaranteed income. Before the pandemic, wealth and income inequality were at all-time highs — disparities that “can be traced back to the origins of racialized capitalism.” But recently, things have gotten even harder. Wages have remained stagnant despite increases in productivity — and despite inflation, making it harder to afford things like rent. Foster denounced the “strong ideology that says that lack of security in this system is a personal failing. That if you can’t pull yourself up, there’s something wrong with you.” There’s something wrong with the system, Foster said. “People are working. The economy isn’t.”

Foster explained that the 1996 “Personal Responsibility and Work Opportunity Reconciliation Act” fundamentally changed welfare by converting the old New Deal-era unlimited grant program into the flat-funded block grant we now know as TANF, leaving determination of eligibility to state discretion and generally “making welfare more punitive.” The Act, Foster said, was built on racist stereotypes, like that of the welfare queen. To make matters worse, it was passed against the backdrop of a persistent devaluation of the labor of people of color

Foster said that even though there didn’t appear to be room in these political conditions to do things differently, she had the “audacity to imagine something else: the ‘adjacent possible.’” She wanted to give cash to people directly, ensuring an income floor regardless of whatever crises that may abound.

Foster worked with the mayor of Stockton, California on the Stockton Economic Empowerment Demonstration (SEED), which provided 125 Stockton residents with $500 monthly payments for two years. 

Dr. Aisha Nyandoro

Foster was connected by a mutual friend to Nyandoro, the CEO of Springboard to Opportunities. Nyandoro had launched The Magnolia Mother’s Trust, which provides low-income Black mothers in Jackson, Mississippi with $1,000 monthly payments for one year. 

With The Magnolia Mother’s Trust, Nyandoro sought to shift away from economic policy “rooted in ‘what is,’ and toward ‘what could be.’” This concept has a rich history, she said, and includes the work of Martin Luther King Jr. and the Black Panthers. She had a specific ‘what if’ in mind: “What if when Black women told us what they needed, we believed them?” What if we sought to overturn the very structures that keep these people down, and subverted the “paternalistic nature of the social safety net”? 

Nyandoro stated that as a researcher, when she has questions, she “goes back to the people.” When she did, she found that although people’s needs were individual, “cash was ubiquitous” — cash was a solution that could address every single one of the problems that she heard. Giving cash directly could help combat a system that “penalizes people for being poor, rather than trying to lift them out of poverty.” 

Why low-income Black mothers? Nyandoro explained that in order to do the work of economic liberation, one must identify what’s wrong with the system. In this case, that meant identifying those who are the most negatively impacted by the system, and using what limited resources are available to help them specifically.

Nyandoro turned to her findings: giving people cash works. These mothers are often working tirelessly, holding down two or three jobs and struggling to make ends meet. After receiving the money, people continue to work and often do so at higher rates (a major fear of opponents of guaranteed income). As a result, their income is often doubled — with life-changing results

Beyond the numbers, Nyandoro emphasized that “we are seeing joy. We don’t talk about joy enough as it relates to Black women.” This money allowed Black women to feel free, to be entrepreneurial: to “dare to dream for the first time — for themselves and for their families.” 

She referenced Chimamanda Ngozi Adichie’s famous speech “The Danger of a Single Story,” explaining that in order to change the narrative, “we need to change the narrator.” It’s time to think about whose voices we center.

In Jackson, Mississippi and Stockton, California, the pair had carried out research about the ‘adjacent possible.’ They’d used cities and states as “laboratories in democracy.” Foster said that their work was paving the way for gradual advances in guaranteed income — slowly, but surely. Then, the pandemic hit.

Suddenly, ideas that had recently been dismissed as too radical were viewed as necessary. Often unable to work, people needed money fast in order to put food on the table and cover their most urgent needs. The federal government rose to the challenge with the American Rescue Plan, providing stimulus checks and pandemic unemployment insurance, plus expanding the Child Tax Credit. “The ‘adjacent possible’”, Foster said, “had become the possible.”

The country saw an “immediate drop in poverty.” The pandemic was revealing, said Foster. It revealed that cash provides time, stress reduction, and resilience. It revealed that cash serves as a tool to create economic security and “build back better.” Above all, it revealed that “poverty is a policy choice that we’re currently making. We could make a different policy choice in order to eliminate it.”

The pandemic also revealed that stimulus checks and the Child Tax Credit were “very popular policies.” Nyandoro has observed support in the form of petitions for monthly cash transfers, the founding of organizations like Mayors for a Guaranteed Income and Guaranteed Income Community of Practice, and the launch of over a hundred guaranteed income pilots of some sort. All these efforts, Nyandoro said, are pushing toward “the same North Star”: centering the needs of families and achieving economic liberation through federal policy.

Foster turned the discussion toward next steps: “these victories have been immense, but could disappear” if the Build Back Better Act does not pass. The Act includes a year-long extension of the expanded Child Tax Credit, a key instantiation of guaranteed income. The Child Tax Credit has bipartisan support

If the extension of the Child Tax Credit passes, then according to Foster, guaranteed income is one step closer to becoming a cornerstone of social policy. This would be a “nail in the coffin of the way we’ve done policy for the last fifty years — that you’re only worth what you do in the world. Every human has dignity and worth, and we have the opportunity to build a policy that says just that.” 

Nyandoro agreed with Foster. As an anti-poverty advocate, she believes in a world without poverty: a world where “everyone can have a life of dignity for themselves and their families.” She believes that the ‘adjacent possible’ is achievable if “we can move beyond our own individual needs in order to view life as a collective, where prosperity is shared rather than hoarded.” She ended by quoting Toni Morrison: “if you have some power, then your job is to empower someone else.”

Last Friday, the House voted to pass the Build Back Better Act, which now heads to the Senate.

Post by Zella Hanson

Building a Just Foundation for Our Energy Transition

Swine Country Documentary Project

As conversations about the energy transition away from fossil fuels become increasingly important (and time-sensitive), some experts in environmental policy aren’t just worried about the conversations themselves. They’re worried about who has a seat at the table — and who doesn’t. 

Sherri White-Williams

On November 8, at “Building a Just Foundation for Our Energy Transition,” a few of these experts — Sherri White-Williamson, Environmental Justice Policy Director at the NC Conservation Network; Josh McClenney, the North Carolina Field Coordinator at Appalachian Voices; and J. Spenser Darden, the Assistant Dean for Diversity and Inclusion at Duke’s Sanford School of Public Policy — spoke about this and other issues. Thomas Klug, a Research Associate at the Duke Energy Access Project, moderated the panel, which was put together by the Sanford Energy & Environment Club.

Klug asked the panelists to define what a “just transition” really means in the context of the panelists’ work, and whether it differs from a diverse and inclusive transition.

J. Spenser Darden

McClenney answered that a just transition entails recognizing that Black, brown, and indigenous communities, as well as low socio-economic status individuals, have historically faced the worst effects of fossil fuel economies. Living in the “physical and economic traction zones,” they’re the ones that lose jobs — like coal miners, in the case of McClenney’s work with Appalachian Voices. 

However, where a diverse and inclusive transition involves “getting people to the table,” just policies will actually reflect the conversations had at the table. An unjust transition, McClenney said, is one where “people clap themselves on the back for doing such a great job having these diverse, inclusive discussions — then make policies that work against their participants.” Ensuring inclusion for communities that have historically been excluded is important, but it’s equally important to make sure the resulting policies are actually inclusive.

Josh McClenney

White-Williams agreed with McClenney — inclusion should never end at “checking the box.” The goal should be to incorporate the input of marginalized voices into resulting policy. White-Williams also added that fairness, while not necessarily guaranteed by diversity and inclusivity, is a key part of a just energy transition. 

Spenser stressed the need to move away from “extractive, colonial” ways of thinking about energy and who makes up society, and to instead incorporate indigenous ways of thinking. He stated that diversity and inclusion is reactive: people realize flaws in the way they’ve built something and try to address it later by incorporating new elements. A just system, on the other hand, is built to be “for and by” communities that have been excluded from the very start.

Klug asked the panelists to recount some of the ways they’ve seen organizations, utilities, and decision makers putting the processes required for a just transition into practice.

McClenney spoke of revelations from the onset of COVID-19 in March 2020. Preventing utility shutoffs became critically important: people were losing jobs or forced to stay at home. They couldn’t come up with the money to pay their utility bills. While fighting utility shutoffs with Appalachian Voices, he saw a group of Knoxville organizations, including Knoxville Water and Energy for All, bringing attention to the fact that the shutoffs were not just a COVID problem. For some Black and brown communities, McClenney said, “keeping the lights on had always been an issue.” These grassroot groups’ advocacy expanded beyond the pandemic: they wanted energy and water recognized as human rights.

Klug asked the panelists how they feel about President Joe Biden’s performance with regard to just transitions in the energy sector — specifically, his January executive orders and recent bipartisan $1.2 trillion infrastructure bill

White-Williams cited a major concern with Biden’s policies: they don’t give enough attention to rural issues. In Sampson county here in North Carolina, massive hog farms overwhelmingly surround communities of color. North Carolina’s new Farm Act will allow Smithfield Foods to build a system to trap methane from hog waste to be processed and eventually used as renewable electricity. But residents living near hog farms already experience toxic water, unbearable stench, and heightened risk of other diseases, and this system would likely make the problem even worse. It’s a textbook example of an unjust energy transition. That’s why environmental and civil rights organizations have asked the EPA to intervene — to no avail, at least thus far. (White-Williams is featured in this article about the current state of affairs.) “Rural America is suffering,” White-Williams said. She wants to see federal agencies using their power to ensure a just energy transition.

McClenney echoed White-Williams’ concern about hog farms, adding that deaths have resulted from providing workers with limited information about the conditions they would be working in — especially those who don’t speak English and whose undocumented status puts them in a vulnerable position. 

On a different note, he thinks Biden’s expansions to Broadband and clean water are a step in the right direction. He stated that with North Carolina’s House Bill 951, which requires the Utilities Commission to cut emissions by 70% by 2030 (even more ambitious than Biden’s executive order, which seeks to cut US emissions in half by 2030), “there are opportunities right now to effect positive change — we just have to do a good job.” It’s about how we get to that carbon reduction goal.

Klug asked how people at universities — faculty, students, and staff alike — can contribute to this work in policy and in advocacy.

White-Williams told the audience to recognize that “having a degree does not make you an expert when you walk into these communities.” Community members have lived experience: they can tell policymakers and activists what they need, not the other way around. Change should be a partnership, and so should research: “Academics have a research question before they’ve even spoken to anyone.” Instead, “listen and learn from the people who have been there all their lives.”

Spenser invited the audience to think about “who the real experts are” in unique and different ways. Institutions like Duke are often separate from the communities they inhabit, serving as a sort of beacon on the hill. “We need to invert this paradigm,” he said.

McClenney added to Spenser’s criticism of schools like Duke, who “throw food out every day and hold dorm rooms empty during the summer while people go hungry and unhoused.” What’s needed is a fundamental reimagination of the university’s relationship to the community it inhabits. He also added to White-Williams’ point about research: it can be merely “another type of extraction” if not carried out in a just manner.

Klug asked the panelists whether we need to assess the impacts of energy policy differently through the lens of research.

McClenney flagged the words “affordability” and “reliability” in energy research, asking the audience to consider who that applies to. Affordability is not just about how rates compare to New York City or California, but whether someone has to forego insulin or go hungry in order to make a payment. By thinking through these words and what they really mean, we can “begin to understand impacts on a deeper level.”

Spenser implored researchers to use an intersectional lens: instead of considering economic impact and efficiency in isolation, to consider the way in which policies “contribute or ameliorate historic disparities.” In order to truly measure impact, efficacy, and outcome, researchers must be “historically aware and community invested.”

White-Williams agreed with McClenney and Spenser, asking researchers to consider whether policies are a “band-aid or a true fix.” She cited North Carolina’s Weatherization Assistance Program, which allocates tens of millions of dollars toward fixing “patched-up” homes that may have serious underlying problems. She wonders whether it may be better to simply spend the money on programs to place people in housing that is “actually livable.”

Klug opened the panel to questions. One audience member asked the panelists what concrete steps they recommend in order to “harness the power of diversity.”

White-Williams reiterated the importance of working with impacted communities, stressing the need for local leaders who can serve as experts on the needs of the community. Elected officials might “sacrifice the needs of these communities for some other interest,” but local advocates can apply pressure where needed.

Spenser pushed back on the question, stating that instead of urgency and speed, “we need to commit to a longer process” — honoring historical legacies and “spending time helping people understand what the conversation is.” 

“Environmental policy isn’t sexy,” Spenser concluded. (“Except,” he added, “for pipelines.”)

Maybe not. But it’s important that it gets made — and that it gets made justly.

Post by Zella Hanson

“News for the Rich, White, and Blue”: Nikki Usher on her new book and the state of American journalism

Erik Carter

News organizations are facing an economic crisis

In their battle for survival, they are “realigning their priorities in ways that favor audiences who are willing to pay.” And those who are willing to pay tend to be rich, white, and politically blue.

On November 3, as part of the DeWitt Wallace Center’s Fall 2021 Information Inequalities Speaker Series, author and University of Illinois associate professor Nikki Usher discussed her new book News for the Rich, White, and Blue: How Place and Power Distort American Journalism.

Usher began by explaining that as newspapers face “market failure,” only non-geographical news is in a position to survive. As news becomes a private good (The Washington Post, The Atlantic, and The New York Times come to mind), the result is inconsistent and unequal access to news. 

According to Usher, 1800 local communities lack any regular access to local news. Usher stated that political consequences result when news organizations pull back from places that don’t exhibit that aforementioned willingness to pay. 

She gave an example of one such consequence: many journalists had their “heads in the sand” about the rising tides of populism in rural America. As a result, they were blindsided when Trump won the election. But the win simply revealed what had been the case all along. 

The New York Times editor Dean Baquet acknowledged this after the election: “We’ve got to do a much better job of being on the road, out in the country… and remind ourselves that New York is not the real world.”

Usher said that another consequence of the delocalization of news is reduced trust: only 11% of Republicans say they trust the media a great deal or a fair amount. Additionally, when places lose news, they grow more polarized, with reductions in split-ticket voting. 

Usher said that she practices a kind of “gestalt scholarship,” employing the tools of ethnography and lived experience as well as quantitative data. She dipped into this side of her research, recounting a few anecdotes which represent the “materiality” of the loss of local news.

In 2018, the LA Times moved from its Downtown home, near Skid Row, to El Segundo. The move was not without controversy. In a 2018 editorial, an anonymous author wrote that “location matters, on both a physical and symbolic level, and… moving the headquarters far away from the local power base and the most important entities and stories the Times covers… is the wrong choice.” 

The Miami Herald’s old home got demolished in 2015. Now the newsroom is near the airport, across from a cow pasture. “It’s bad for the psyche for there to be no building to exist for people to see every day,” said an editor. (A recent bit of unnerving news regarding the future of the Herald and journalism at large.)

Usher then stated that newsrooms are “places of power” that are becoming “increasingly inhospitable places for those who are non-white and who lack financial resources.” 

In June 2020, The Philadelphia Inquirer’s top editor resigned after the publication of an article with the headline “Buildings Matter, Too,” led to a walkout by dozens of staff members. At the LA Times, Latinx journalists penned an open letter drawing attention to the fact that its 13% Latinx newsroom does not reflect its nearly 50% Latinx community. In Detroit, the disparity is even worse: an 80% Black population is served by a newsroom that is only 14% Black. 

In 1968, the Kerner Commission put down a series of recommendations to improve diversity, noting that the journalistic profession was “shockingly backward” in its absence of Black journalists. The American Society of News Editors set a target date for newsrooms to be at parity with the populations they represented: 2000. They’ve since pushed the deadline to 2025. 

It’s not looking good. That’s because, according to Usher, newsrooms aren’t hiring, and “when newsrooms don’t hire, they don’t hire minority journalists.”

Usher also touched on the “death of the working class reporter.” Increasingly, the only young people who are not deterred by journalism’s instability and lack of lucrativity are those who come from copious amounts of privilege. Add this to the inability of poorer students to pursue resume-building journalism activities alongside work-study jobs, and the preference of news outlets for the oft-wealthy students of elite universities, and one can see why “journalism is becoming a profession for the elite.” 

Usher said that when “newsrooms become bastions of privilege, [that’s] bad news.” Losing journalists who come from blue-collar backgrounds means losing the ability to “empathize” with a whole set of experiences.

Usher said that as news revenue goes increasingly digital, reliance on those willing to pay is even more pronounced, with “consequences for equity in access and geographically specific news coverage.” She referenced The New York Times, whose rise “mirrors the rise in inequality” of access to news. “They know they’re leaving people behind,” Usher said. She quoted Dean Baquet, who acknowledged that 98% of Americans “were now excluded from The New York Times’ journalism and might well have to do with substandard information.”

Usher also discussed “Goldilock newspapers” — not too big, not too small, but just right for survival according to the “upside-down logic” of digital advertising. The problem is that, as Mike Wilson of the Dallas Morning News put it, “the pursuit of digital subscriptions has honed our focus on what we’re covering” — sometimes to the detriment of local readers. As a result of this phenomenon, Usher has seen reduced coverage in places considered too low-income to get advertisers. In one instance, she saw a dismissal of concerns about ad- and malware clunking up the computers of those with inferior Internet access because “those people are less likely to subscribe anyway.” 

Where does this leave us? Usher identified a few potential solutions. She reiterated calls for more inclusive newsrooms, and added her own call for higher-ed financial aid reform so that lower-income students can have a fighting chance at pursuing journalism. She discussed the need for a “post newspaper consciousness” — to acknowledge that we cannot save the newspaper, but we can identify what journalism does best and save those “special parts.” 

She left the audience with a final recommendation: journalism should “embrace the partisan media system.” Usher clarified her position: the news media like The New York Times “hides behind a veil of neutrality,” when this is only an (unconvincing) illusion. “People want to see them advocate for social justice,” she said, and she agrees. Usher doesn’t think polarization is inherently bad “if it’s polarization toward social justice and breaking down systemic inequality.”

“There’s no use assuaging people who have given up and aren’t listening. And then you have lots of people unsubscribing because the phony neutrality was irritating them,” Usher said. For organizations like the Times, the veil of neutrality is looking like a lose-lose.

She advised them to “go for those who are still listening. And just own it.”

Post by Zella Hanson

Undergraduate Researchers William He and Annie Wang Dig Deeper into Hypergraphs

Like most things during the height of the pandemic, research that could be conducted virtually was conducted virtually. And that’s why, although juniors William He and Annie Wang have been working together on a research project since last September, they’ve never actually met in person.

He, a Math major from Houston, and Wang, a Computer Science and Math double-major from Raleigh, both work in the lab of Professor Debmalya Panigrahi, where the focus is on research in theoretical computer science, particularly graph algorithms. Wang and He did work on hypergraphs, and, after I asked them to explain what hypergraphs were in the most elementary terms (I am not a Math major), they went back and forth on how exactly to relay hypergraphs to a lay audience.

Annie Wang

Here is what they landed on: hypergraphs are essentially generalizations of normal graphs. In a normal graph, there are edges –each edge connects two points. There are also vertices – each point is a vertex. But in a hypergraph, each edge connects multiple points.

He and Wang were looking at a generalization of graph reliability – if all edges disconnect at a certain probability, what is the probability that the graph itself will break down because crucial edges are disconnecting?

William He

Their research adds to existing research on maximum flow problems, which Wikipedia tells us “entail finding a feasible flow through a flow network to obtain the maximum possible flow rate.” In a landmark paper written by T.E. Harris and F.S. Ross in 1955, the two researchers formulated the maximum flow problem using an example of the Soviet railroad and considering what cuts in the railroad would disconnect the nation entirely – and what cuts could be made with little impact to railway traffic flow. 

Maximum flow problems are a core tenet of optimization theory, used widely in disciplines from math to computer science to engineering. You may not know what mathematical optimization is, but you’ve seen it in action before: in electronic circuitry, in economics, or unsurprisingly, used by civil engineers in traffic management.

It’s expected to be incredibly difficult to exactly calculate the target value of He and Wang’s question. They landed on an approximation that they know is far from the exact calculation, but still brings them closer to understanding hypergraph connectivity more fully.

The process

So what draws them to research? For He, it’s like an itch. He describes that “sometimes I’ll be watching a movie, and then thirty minutes in I’m thinking about a possible solution to a math problem and then I can’t focus on the movie anymore.” You can’t get on with things until you scratch the itch, but the best part to him is when things finally start to make sense. For Wang, research is just plain fun. She enjoys learning about algorithms and theorems, and she loves the opportunity to work with professors who are at the forefront of their field.

After Duke, He wants to pursue a PhD, likely in theoretical computer science, while Wang is still weighing her options – whether she wants to go into academia or industry. While He came into Duke as a prospective Economics major, in quarantine especially he realized just how much he enjoyed math for the sake of itself.

Wang, similarly, thought she would want to pursue software engineering, but she’s slowly realizing that she likes “solving the problems within the field – problems that I need a PhD to solve.” The magic of research, for her, is that “you’re solving problems that no one has answers to yet.” And wherever the future takes both of them, she says that in doing research, even at the undergraduate level, “you feel like you’re pushing the boundary a tiny bit, and that’s a cool feeling.”

Post by Meghna Datta, Class of 2023

When the gut’s internal ecosystem goes awry, could an ancient if gross-sounding treatment make it right?

Lemur researchers make a case for fecal transplants to reduce the side effects of antibiotics. Photo by David Haring, Duke Lemur Center.

Dr. Cathy Williams knew something wasn’t right. The veterinarian had felt off for weeks after her 2014 trip to Madagascar.

At first she just felt bloated and uncomfortable and wasn’t interested in eating much. But eventually she developed a fever and chills that sent her to the emergency room.

When tested, doctors found that what she had wasn’t just a stomach bug. She was suffering from an infection of Clostridium difficile, a germ that causes severe diarrhea and abdominal pain and can quickly become life-threatening if not treated promptly.

“It was horrible,” Williams said.

The condition is often triggered when antibiotics disrupt the normal balance of bacteria that inhabit the gut, allowing “bad” bacteria such as C. difficile to multiply unchecked and wreak havoc on the intestines.

To get her infection under control, Williams asked her doctors if they could try an approach she and other veterinarians had used for decades to treat lemurs with digestive problems at the Duke Lemur Center. The procedure, known as a fecal microbiota transplant, involves taking stool from a healthy donor and administering it to the patient to add back “good” microbes and reset the gut.

At the time it was considered too experimental for clinical use in human cases like Williams’. She was prescribed the standard treatment and was sent home from the hospital, though she wouldn’t feel well enough to go back to work for another month. But now new research in lemurs is confirming what Williams and others long suspected: that this ancient if gross-sounding treatment can help an off-kilter gut microbiome get back to normal.

In a recent study in the journal Animal Microbiome, a research team led by Duke professor Christine Drea, former PhD student Sally Bornbusch and colleagues looked at the gut microbiomes of 11 healthy ring-tailed lemurs over a four-month period after receiving a seven-day course of the broad-spectrum antibiotic amoxicillin.

The lemurs were split into two experimental groups. One was a wait-and-see group, with continued follow-up but no further treatment after the antibiotics. The other group was given a slurry of their own feces, collected prior to antibiotic treatment and then mixed with saline and fed back to the same animal after their course of antibiotics was over.

“It sounds crazy,” Williams said. But she has used a similar procedure since the 1990s to treat illnesses in Coquerel’s sifaka lemurs, whose infants are known to eat their mother’s poop during weaning — presumably to get the microbes they’ll need to transition to solid food.

A baby Coquerel’s sifaka tries some of her first solid foods. Photo by David Haring.

Drea, Bornbusch and team used genetic sequencing techniques to track changes in the lemurs’ gut microbiome before, during and after treatment.

As expected, even a single course of antibiotics caused the numbers of microbes in their guts to plunge compared with controls, briefly wiping out species diversity in both experimental groups before returning to baseline.

“Antibiotics had dramatic effects, even in healthy animals,” Drea said.

But in terms of which types of bacteria bounced back and when, the patterns of recovery in the two groups were different. Lemurs that received the “poop soup” treatment started to stabilize and return to their pre-antibiotic microbiome within about two weeks. In contrast, the bacterial composition in the wait-and-see group continued to fluctuate, and still hadn’t quite returned to normal even after four months of observation.

This kind of therapy isn’t new. Reports of using fecal transplants to treat people suffering from food poisoning or diarrhea date back as far as fourth century China. The evidence for its effectiveness in captive settings has Bornbusch advocating for freezing stool at Smithsonian’s National Zoo, where she is now a postdoctoral fellow.

“If we can bank feces from animals when they’re healthy, that can be a huge benefit down the road,” Bornbusch said. “It can help the animals get better, faster.”

And now if any of her lemur patients were to get sick with C. difficile like she did, Williams said, “I would absolutely go with a fecal microbiota transplant.”

“People are put off by it,” Drea said, “But the disgust for this approach might actually have been holding up a fairly cheap and useful cure.”

Ring-tailed lemurs at the Duke Lemur Center in North Carolina. Photo by David Haring, Duke Lemur Center

This research was supported by the National Science Foundation (BCS 1749465), the Duke Lemur Center Director’s Fund, and the Duke Microbiome Center.

CITATION: “Antibiotics and Fecal Transfaunation Differentially Affect Microbiota Recovery, Associations, and Antibiotic Resistance in Lemur Guts,” Sally L. Bornbusch, Rachel L. Harris, Nicholas M. Grebe, Kimberly Roche, Kristin Dimac-Stohl, Christine M. Drea. Animal Microbiome, Oct. 1, 2021. DOI: 10.1186/s42523-021-00126-z.

By Robin Ann Smith

Page 8 of 41

Powered by WordPress & Theme by Anders Norén