Meet Ke Dong, a biology professor at Duke University. She’s a lover of nature, a great cook, and a Lupus survivor. About 20-25 years ago, she developed Lupus during her research years at Michigan State University. Her time with this autoimmune disease was not kind. “The Lupus brought depression,” she said.
Fortunately, she was surrounded by amazing peers and her passion: research. Dong’s research focuses on ion channels and their reaction to various toxins and stimuli. These ion channels are incredibly important to the physiology of insects because of their impact on neuronal activity.
Duke biology professor Ke Dong.
However, her passion didn’t develop from thin air. Dong grew up on a college campus in southeastern China. With both parents leading careers as professors — her father in history and her mother in biochemistry — she had the amazing opportunity to develop her passions early in childhood.
Growing up, she “had never been afraid of insects” as her mother’s work focused on the development of an increased production rate of silk in silkworms. However, it was the incidents in the area around her that sparked her passion. People in the area were often poisoned from the consumption of insecticides from the rice they were growing. This piqued her interest in toxicology as she was curious about how these insecticides were toxic to the townspeople.
Combining her fearlessness in the face of insects and her interest in toxicology, Dong has found the best of both worlds.
Dong also loves to dabble in the culinary worlds of a diverse range of cultures. As she travels from country to country, she brings with her the memorable flavors of each dish she tastes. Once arriving back home, she immediately purchases cookbooks from those countries to add to her rolodex of culinary skills. As she reads each recipe on her nightstand, she dreams of ways to introduce various flavors and techniques into her dishes. A creative cook, she has no time for following measurements. Her kitchen is her sandbox and allows her to dance with each flavor in her pot, adding less sugar but a little more salt.
Dong has been through ups and downs in her life, but there’s nothing that’s going to stop her from her passion: research.
Dr. Akankshi Munjal is a developmental biology researcher at Duke University, who studies the development and mutations of inner ear tissue in zebrafish, and how that may be caused by genome disorders.
Akankshi Munjal, assistant professor of cell biology
From a young age, Munjal has been fascinated by watching things being built and developed. Her grandfather was a civil engineer, and she was inspired by the many blueprints littering his home. Growing up, she wanted to be an architect.
Though she found inspiration elsewhere, and did not pursue architecture, in a way, her career mirrors this, “I guess I am not an architect, but I still watch embryos being built, so that kept with me – how you shape things.”
The inspiration of Munjal’s current career came to her in high school. Growing up, she lived in a large city in India, and did not have much exposure to science fields and research. “If you don’t see it around you, it’s not something you see as an option.”
However, she was able to find inspiration from a few of her instructors, “There were some teachers who were very inspiring in exposing that there is research out there, that you can be at the bench, ask questions, and address them using experiments.”
She was also involved with a project dealing with bacteria that could process heavy metals in the Yamuna river near Delhi, India, and this helped introduce the idea of research as a potential career path.
Though most of Munjal’s work has moved toward lab management, the research is what she really loves, “I could spend days in the microscope room, watching development happen.”
The interesting thing about zebrafish, is that their eggs are transparent, and develop outside of the parent organism. This provides an incredible way to observe the development of tissues under a microscope. Zebrafish also share 70% of the DNA of humans, which makes them a great model organism to observe human disorders and how they affect tissue. The ability to witness this development is Munjal’s favorite part of the job,“It’s why I love what I do, we are able to watch these things happen, in the lab.”
When asked what she wished she would’ve learned earlier on, she mentioned the classic comparison of teaching a man to fish, as opposed to giving him a fish. She applies this saying to the process of learning. In her earlier education, there was an emphasis on collecting and memorizing information and facts, rather than learning how to gather knowledge. An emphasis on academic intelligence, as opposed to emotional intelligence.
Looking back, this presentation and memorization of facts was less helpful, “Some of them are not facts, some of them are interpretations, so if there was more information on collecting knowledge, that would be more helpful.”
Munjal loves to watch things being developed. This not only applies to her research in developmental biology, and her former passion for architecture, but also to her love of collecting knowledge.
A few blocks from Duke’s East Campus, there is a small building whose past lives include a dentist office, a real estate office, and a daycare. Now it is a museum.
A mural on the back wall of the museum, showing animals like the elephant bird at full size. Photo courtesy of Matt Borths, Ph.D.
Glass cases in the front room are lined with ancient fossils and more recent specimens less than 10,000 years old. Take Lagonomico, a creature that lived some 12-15 million years ago and whose name means “pancake,” in reference to the smashed shape of its remains. Or the tiny skull of a modern-day cotton-top tamarin. Even the enormous egg of an elephant bird, a ten-foot-tall bird that lived in Madagascar until it went extinct sometime in the last 1000 years.
A back room holds fossil discoveries still encased in rock. Special tools and scanning technology will reveal the creatures inside, relics of a very different world that can still yield revelations millions of years after their deaths.
These fossils are still partly encased in rock. Special technology like CT scans can reveal which part of a rock contains a fossil. The marks on the paper indicate where a fossil is located.
Matt Borths, Ph.D., curator of the Duke Lemur Center’s fossils, explained that while many fossil collections focus on a particular location, this one has a different theme: the story of primate evolution.
Lemurs, Borths said, are our most distant primate relatives. About 60 million years ago, soon after the extinction of the dinosaurs, the “lemur line and monkey-ape-human line split.” Studying both modern lemurs and their ancestors can give us a “glimpse of a distant past.”
An ancient lemur ancestor from Wyoming. Primates went extinct in North America over 30 million years ago.
Primates are a group of mammals that include humans and other apes, monkeys, lemurs, lorises, bushbabies, and tarsiers. Many primates today live in Africa and South America, but they did not originate on either continent. Primates are believed to have evolved further north and migrated into Africa about 50 million years ago. As the global climate grew cooler and dryer, equatorial Africa remained warm and wet enough for primates. Over time, apes, monkeys, and lemurs diverged from their shared primate ancestors, but not all of them stayed in Africa.
Africa is currently home to bushbabies and lorises, which are both lemur relatives, but most of lemur evolution and diversification took place in Madagascar, the island nation where all of the world’s 100 species of lemurs live today. “New World monkeys,” meanwhile, are found in South America. How did lemurs and monkeys get from Africa—which was at the time completely surrounded by water—to where they live today? Both groups are believed to have crossed open ocean on rafts of plant material.
Scientists have direct evidence of modern animals rafting across bodies of water, and they believe that ancient lemur and monkey ancestors reached new land masses that way, too. Mangrove systems, adapted to ever-changing coastal conditions, are particularly prone to forming rafts that break away during storms. Animals that are on the plants when that happens can end up far from home. Not all of them survive, but those that do can shape the history of life on earth.
“Given enough time and enough unfortunate primates,” Borths said, “eventually you get one of these rafts that goes across the Mozambique Channel” and reaches Madagascar. Madagascar has been isolated since the time of the dinosaurs, and most of its species are endemic, meaning they are found nowhere else on earth. When lemur ancestors reached the island, they diversified into dozens of species filling different ecological niches. A similar process led to the evolution of New World monkeys in South America.
Some of the species in this case went extinct within the past few centuries.
The history of primate evolution is still a work in progress. The Duke Lemur Center Museum of Natural History seeks to fill in some of the gaps in our knowledge through research on both living lemurs and primate fossils. This museum, Borths said, “brings basically all of primate evolution together in one building.” Meanwhile, living lemurs at the Lemur Center can help researchers understand how primate diets relate to teeth morphology, for example.
Paleontology is the study of fossils, but what exactly is a fossil? The word “fossil,” Borths said, originally referred to anything found in the ground. Over time, it came to mean something organic that turns to stone. Some ancient organisms are not fully fossilized. They can still preserve bone tissue and even proteins, evidence that they have not yet transformed completely into stone. The current definition of a fossil, according to Borths, is “anything from a living organism that is older than 10,000 years old.” Specimens younger than that are called subfossils.
Fossil Preparator Karie Whitman in the Duke Lemur Center Museum of Natural History. The grooves in the stones are made by air scribe tools, which are used to separate fossils from surrounding rock.
The Lemur Center does important research on fossils, but that is not the only component of its mission. Education Programs Manager Megan McGrath said that the Lemur Center weaves together research, conservation, and education in an “incredibly unique cocktail” that “all forms a feedback loop.” McGrath and Borths also co-host a Duke Lemur Center podcast.
Conservation is a crucial component of the study of lemurs. Lemurs are the most endangered mammals on the planet, and some are already gone.
Human and wildlife survival are interlinked in complex ways, and conservation solutions must account for the wellbeing of both. Subsistence agriculture and other direct human activities can decimate ecosystems, but extinctions are also caused by broader issues like climate change, which threatens species on a global scale. Humanity’s impact on Madagascar’s wildlife over the last several thousand years is a “really complicated puzzle to tease apart,” McGrath said.
A display case in the museum, including an egg from the extinct elephant bird and a seed from a mousetrap tree. The mousetrap tree relies on large animals to disperse its seeds. That role was once filled by now-extinct species like the elephant bird. Now humans and cattle disperse the seeds instead.
Some of the museum’s specimens are truly ancient, but others are from modern animals or species that went extinct only recently. Giant elephant birds roamed Madagascar as recently as a thousand years ago. The sloth lemur may have survived until 400 years ago. Borths puts the timescale of recent extinctions into perspective. At a time when modern species like the white-tailed deer were already roaming North America, Madagascar was still home to creatures like sloth lemurs and ten-foot elephant birds.
A model of a sloth lemur skeleton (center, hanging from branch). Sloth lemurs lived in Madagascar until they went extinct about 400 years ago.
A model of a sloth lemur hangs in the museum, but no one alive has ever seen one breathing. No one will ever see or hear one again. But a ghost of it may exist in Malagasy stories about the tretretre, a monster that was said to have long fingers and a short tail. The word tretretre is thought to be an onomatopoeia of the call of a sloth lemur, an animal whose own voice is gone forever.
Learn about these and other stories of our evolutionary cousins at the museum’s next open house on Saturday, November 23, from 1-4 PM.
In some parts of the world, animals are going extinct before scientists can even name them.
Such may be the case for mouse lemurs, the saucer-eyed, teacup-sized primates native to the African island of Madagascar.
Various species of mouse lemurs found in Madagascar. Photos by Sam Hyde Roberts
There, deforestation has prompted the International Union for the Conservation of Nature (IUCN) to classify some of these tree-dwelling cousins as “endangered” even before they are formally described.
Duke professor Anne Yoder has been trying to take stock of how many mouse lemur species are alive today before they blink out of existence.
It’s not an easy task. Mouse lemurs are shy, they only come out at night, and they live in hard-to-reach places in remote forests. To add to the difficulty, many species of mouse lemurs are essentially lookalikes. It’s impossible to tell them apart just by peering at them through binoculars.
When Yoder first started studying mouse lemurs some 25 years ago, there were only three distinct species recognized by scientists. Over time and with advances in DNA sequencing, researchers began to wonder if what looked like three species might actually be upwards of two dozen.
In a new study, Yoder and dozens of colleagues from Europe, Madagascar and North America compiled and analyzed 50 years of hard-won data on the physical, behavioral and genetic differences among mouse lemurs to try to pin down the true number.
While many mouse lemur species look alike, they have different diets, and males use different calls to find and woo their mates, the researchers explain.
By pinning down their number and location, researchers hope to make more informed decisions about how best to help keep these species from the brink.
The study was published Sept. 27 in the journal Nature Ecology & Evolution.
Braxton Craven Distinguished Professor of Evolutionary Biology, Anne Yoder was director of the Duke Lemur Center from 2006 to 2018.
From tiny flies, Duke researchers are finding new clues to how the brain sets up its circuitry.
In her time at Duke, Khanh Vien figures she’s dissected close to 10,000 fly brains. For her PhD she spent up to eight hours each day peering at baby flies under the microscope, teasing out tiny brains a fraction the size of a poppy seed.
“I find it very meditative,” she said.
Vien acknowledges that, to most people, fruit flies are little more than a kitchen nuisance; something to swat away. But to researchers like her, they hold clues to how animal brains — including our own — are built.
While the human brain has some 86 billion neurons, a baby fruit fly’s brain has a mere 3016 — making it millions of times simpler. Those neurons talk to each other via long wire-like extensions, called axons, that relay electrical and chemical signals from one cell to the next.
Vien and other researchers in Professor Pelin Volkan’s lab at Duke are interested in how that wiring gets established during the fly’s development.
By analyzing a subset of neurons responsible for the fly’s sense of smell, the researchers have identified a protein that helps ensure that new neurons extend their axons to the correct spots in the olfactory area of the young fly’s brain and not elsewhere.
Because the same protein is found across the animal kingdom, including humans, the researchers say the work could ultimately shed light on what goes awry within the brains of people living with schizophrenia and other mental illnesses.
Their findings are published in the journal iScience.
Khanh Vien earned her PhD in developmental and stem cell biology in Professor Pelin Volkan’s lab at Duke.
Look at the nearest window. What did you see first—the glass itself or what was on the other side? For birds, that distinction is a matter of life and death.
A dead red-eyed vireo above the entrance to the Brodhead Center at Duke. Every year, millions of birds die after colliding with windows. Buildings with lots of glass are particularly dangerous.
Every year, up to one billion birds die from hitting windows. Windows kill more birds than almost any other cause of human-related bird mortality, second only to feral and domestic cats. Both the transparency and reflectiveness of glass can confuse flying birds. They either don’t see the glass at all and try to fly through it, or they’re fooled by reflections of safe habitat or open sky. And at night, birds may be disoriented by lit-up buildings and end up hitting windows by mistake. In all cases, the result is usually the same. The majority of window collision victims die on impact. Even the survivors may die soon after from internal bleeding, concussions, broken bones, or other injuries.
Madison Chudzik, a biology Ph.D. student in the Lipshutz Lab at Duke, studies bird-window collisions and migrating birds. “Purely the fact that we’ve built buildings is killing those birds,” she says.
Every spring and fall, billions of birds in the United States alone migrate to breeding and wintering grounds. Many travel hundreds or thousands of miles. During peak migration, tens of thousands of birds may fly across Durham County in a single night. Not all of them make it.
Chudzik’s research focuses on nocturnal flight calls, which migrating birds use to communicate while they fly. Many window collision victims are nocturnal migrants lured to their deaths by windows and lights. Chudzik wants to know “how we can use nocturnal flight calls as an indicator to examine collision risks in species.”
Chudzik (back) setting up one of her recording devices on the Museum of Science and Industry in Chicago. The devices record flight calls from birds migrating at night. Image courtesy of Chudzik.
Previous research, Chudzik says, has identified a strong correlation between the number of flight calls recorded on a given night and the overall migration intensity that night. “If sparrows have a high number of detections, there is likely a high number migrating through the area,” Chudzik explains. But some species call more than others, and there is “taxonomic bias in collision risk,” with some species that call more colliding less and vice versa. Chudzik is exploring this relationship in her research.
Unlike bird songs, nocturnal flight calls are very short. The different calls are described with technical terms like “zeep” and “seep.” Chudzik is part of a small but passionate community of people with the impressive ability to identify species by the minute differences between their flight calls. “It’s a whole other world of… language, basically,” Chudzik says.
Chudzik can identify a species not only by hearing its flight call but also by seeing its spectrogram, a visual representation of sound. This spectrogram, from a recording on Adler Planetarium, has flight calls from four species. The x-axis represents time, while the y-axis shows frequency. The brightness or intensity indicates amplitude. Image from Chudzik.
She began studying nocturnal flight calls for research she did as an undergraduate, but her current project no longer needs to rely on talented humans to identify every individual call. A deep learning model called Nighthawk, trained on a wealth of meticulous flight call data, can identify calls from their spectrograms with 95% accuracy. It is free and accessible to anyone, and much of the data it’s been trained on comes from non-scientists, such as submissions from a Facebook community devoted to nocturnal flight calls. Chudzik estimates that perhaps a quarter of the people on that Facebook page are researchers. “The rest,” she says, “are people who somehow stumbled upon it and… fell in love with nocturnal flight calling.”
In addition to studying nocturnal flight calls, Chudzik’s research will investigate how topography, like Lake Michigan by Chicago, affects migration routes and behavior and how weather affects flight calls. Birds seem to communicate more during inclement weather, and bad weather sometimes triggers major collision events. Last fall in Chicago, collisions with a single building killed hundreds of migratory birds in one night.
Chudzik had a recorder on that building. It had turned off before the peak of the collision event, but the flight call recordings from that night are still staggering. In one 40-second clip, there were 300 flight calls identified. Normally, Chudzik says, she might expect a maximum of about seven in that time period.
Nights like these, with enormous numbers of migrants navigating the skies, can be especially deadly. Fortunately, solutions exist. The problem often lies in convincing people to use them. There are misconceptions that extreme changes are required to protect birds from window collisions, but simple solutions can make a huge difference. “We’re not telling you to tear down that building,” Chudzik says. “There are so many tools to stop this from happening that… the argument of ‘well, it’s too expensive, I don’t want to do it…’ is just thrown out the window.”
A yellow-bellied sapsucker collision casualty in front of the French Family Science Center last year.
What can individuals and institutions do to prevent bird-window collisions?
Turn off lights at night.
For reasons not completely understood, birds flying at night are attracted to lit-up urban areas, and lights left on at night can become a death trap. Though window collisions are a year-round problem, migration nights can lead to high numbers of victims, and turning off non-essential lights can help significantly. One study on the same Chicago building where last year’s mass collision event occurred found that halving lighted windows during migration could reduce bird-window collisions by more than 50%.
Chudzik is struck by “the fact that this is such a big conservation issue, but it literally just takes a flip of a switch.” BirdCast and Audubon suggest taking actions like minimizing indoor and outdoor lights at night during spring and fall migration, keeping essential outdoor lights pointed down and adding motion sensors to reduce their use, and drawing blinds to help keep light from leaking out.
Use window decals and other bird-friendly glass treatments.
There are many products and DIY solutions intended to make windows safer for birds, like window decals, external screens, patterns of dots or lines, and strings hanging in front of a window at regular intervals. For window treatments to be most effective, they should be applied to the exterior of the glass, and any patterning should be no more than two inches apart vertically and horizontally. This helps protect even the smallest birds, like kinglets and hummingbirds.
It can be hard to see from a distance, but these windows on Duke’s Fitzpatrick Center have been retrofitted with tiny white dots, an effective strategy to reduce bird-window collisions.
A 2016 window collision study at Duke conducted by several scientists, including Duke Professor Nicolette Cagle, Ph.D., identified the Fitzpatrick Center as a window collision hotspot. As a result, Duke retrofitted some of the building’s most dangerous windows with bird-friendly dot patterning. Ongoing collision monitoring has revealed about a 70% reduction in collisions for that building since the dots were added.
One obstacle to widespread use of bird-friendly design practices and window treatments is concerns about aesthetics. But bird-friendly windows can be aesthetically pleasing, too, and “Dead birds hurt your aesthetic anyway.”
If nothing else, don’t clean your windows.
Bird-window collisions don’t just happen in cities and on university campuses. In fact, most fatal collisions involve houses and other buildings less than four stories tall. Window treatments like the dots on the Fitzpatrick building can be costly for homeowners, but anything you can put on the outside of a window will help.
“Don’t clean your windows,” Chudzik suggests—smudges may also help birds recognize the glass as a barrier.
Window collisions at Duke
The best thing Duke could do, Chudzik says, is to be open to treating more windows. Every spring, students in Cagle’s Wildlife Surveys class, which I am taking now, collect data on window collision victims found around several buildings on campus. Meanwhile, a citizen science iNaturalist project collects records of dead birds seen by anyone at campus. If you find a dead bird near a window at Duke, you can help by submitting it to the Bird-window collisions project on iNaturalist. Part of the goal is to identify window collision hotspots in order to advocate for more window treatments like the dots on the Fitzpatrick Center.
Spring migration is happening now. BirdCast’s modeling tools estimate that 260,000 birds crossed Durham County last night. They are all protected under the Migratory Bird Treaty Act. However, Chudzik says, “We haven’t thought to protect them while they’re actually migrating.” The law is intended to protect species that migrate, but “it’s not saying ‘while you are migrating you have more protections,’” Chudzik explains. Some have argued that it should, however, suggesting that the Migratory Bird Treaty Act should mandate safer windows to help protect migrants while they’re actually migrating.
“This whole world comes alive while we’re asleep, and… most people have no idea,” Chudzik says about nocturnal flight calls. She is shown here on Northwestern University, one of the Chicago buildings where she has placed recorders for her research. Photo courtesy of Chudzik.
We can’t protect every bird that passes overhead at night, but by making our buildings safer, we can all help more birds get one step closer to where they need to go.
For some people, the word “rainforest” conjures up vague notions of teeming jungles. But Camille DeSisto sees something more specific: a complex interdependent web.
For the past few years, the Duke graduate student has been part of a community-driven study exploring the relationships between people, plants and lemurs in a rainforest in northern Madagascar, where the health of one species depends on the health of others.
Many lemurs, for example, eat the fruits of forest trees and deposit their seeds far and wide in their droppings, thus helping the plants spread. People, in turn, depend on the plants for things like food, shelter and medicines.
But increasingly, deforestation and other disturbances are throwing these interactions out of whack.
DeSisto and her colleagues have been working in a 750,000-acre forest corridor in northeast Madagascar known as the COMATSA that connects two national parks.
The area supports over 200 tree species and nine species of lemurs, and is home to numerous communities of people.
A red-bellied lemur (Eulemur rubriventer) in a rainforest in northeast Madagascar. Photo by Martin Braun.
“People live together with nature in this landscape,” said DeSisto, who is working toward her Ph.D. in ecology at the Nicholas School of the Environment.
But logging, hunting and other stressors such as poverty and food insecurity have taken their toll.
Over the last quarter century, the area has lost 14% of its forests, mostly to make way for vanilla and rice.
This loss of wild habitats risks setting off a series of changes. Fewer trees also means fewer fruit-eating lemurs, which could create a feedback loop in which the trees that remain have fewer opportunities to replace themselves and sprout up elsewhere — a critical ability if trees are going to track climate change.
DeSisto and her colleagues are trying to better understand this web of connections as part of a larger effort to maximize forest resilience into an uncertain future.
The research requires dozens of students and researchers from universities in Madagascar and the U.S., not to mention local botanists and lemur experts, the local forest management association, and consultants and guides from nearby national parks, all working together across time zones, cultures and languages.
Forest field team members at camp (not everyone present). Photo credit: Jane Slentz-Kesler.
Together, they’ve found that scientific approaches such as fecal sampling or transect surveys can only identify so much of nature’s interconnected web.
Many lemurs are small, and only active at night or during certain times of year, which can make them hard to spot — especially for researchers who may only be on the ground for a limited time.
To fill the gaps, they’re also conducting interviews with local community members who have accumulated knowledge from a lifetime of living on the land, such as which lemurs like to munch on certain plants, what parts they prefer, and whether people rely on them for food or other uses.
By integrating different kinds of skills and expertise, the team has been able to map hidden connections between species that more traditional scientific methods miss.
For example, learning from the expertise of local community members helped them understand that forest patches that are regenerating after clear-cutting attract nocturnal lemurs that may — depending on which fruits they like to eat — promote the forest’s regrowth.
Camille DeSisto after a successful morning collecting lemur fecal samples.
Research collaborations aren’t unusual in science. But DeSisto says that building collaborations with colleagues more than 9,000 miles away from where she lives poses unique challenges.
Just getting to her field site involves four flights, several bumpy car rides, climbing steep trails and crossing slippery logs.
“Language barriers are definitely a challenge too,” DeSisto said.
She’s been studying Malagasy for seven years, but the language’s 18 dialects can make it hard to follow every joke her colleagues tell around the campfire.
To keep her language skills sharp she goes to weekly tutoring sessions when she’s back in the U.S., and she even helped start the first formal class on the language for Duke students.
“I like to think of it as language opportunities, not just language barriers,” DeSisto said.”
“Certain topics I can talk about with much more ease than others,” she added. “But I think making efforts to learn the language is really important.”
When they can’t have face-to-face meetings the team checks in remotely, using videoconferencing and instant messaging to agree on each step of the research pipeline, from coming up with goals and questions and collecting data to publishing their findings.
“That’s hard to navigate when we’re so far away,” DeSisto said. But, she adds, the teamwork and knowledge sharing make it worth it. “It’s the best part of research.”
This research was supported by Duke Bass Connections (“Biocultural Sustainability in Madagascar,” co-led by James Herrera), Duke Global, The Explorers Club, Primate Conservation, Inc., Phipps Conservatory and Botanical Gardens, and the Garden Club of America.
Filmmaker Ashley Hillard and cinematographer Alan Dunkin in Yellowstone. Photo by Hillard.
“I have been interested in storytelling and the environment since my earliest memories,” says Ashley Hillard, a documentary filmmaker with an interest in wildlife management and conservation practices in the United States.
Hillard has a background in film, largely with production companies, talent agencies, and independent projects on the side, but she later shifted into climate tech recruitment. Now she is pursuing an environmental leadership Masters in Environmental Management degree at Duke while working on documentary projects. She is also a Communications Assistant Intern in the Duke Environmental Law and Policy Clinic.
She has been working on a film called “Coexistence,” a documentary that spotlights North American species and wildlife management practices. Hillard got the idea for the project when she noticed that U.S.-based researchers often choose to study species in other countries, perhaps “because it’s easier to go over and say ‘Why don’t you try this?’ rather than having to deal with issues in your backyard.”
“We need to pay attention to our own backyards,” Hillard emphasizes. “The hope,” she says, is “more laws and policies and values change along with behaviors as we become more informed and more aware.” She also believes that “local efforts can usually go further.” Part of her goal in creating films about conservation is to help viewers realize that “individuals can be part of change.” Films and other forms of storytelling can inform people about specific species and conservation efforts, but Hillard hopes her work can help shift perspectives more broadly as well. Effective conservation is often “a social attitudes and values issue,” Hillard says. “There needs to be a shift in how we view the environment.”
An American bison that Hillard saw while filming in Yellowstone. Photo by Hillard.
Shifting baseline syndrome is the idea that people’s expectations of how nature should look reflect their own experiences rather than an accurate picture of the natural state of landscapes, flora, fauna, and wildlife abundance. Our understanding of what nature “normally” looks like changes over generations and is skewed by the societies and time periods we inhabit. The more we damage our environments, the less we collectively remember what they looked like before—and the less motivated we may be to restore them to a condition most of us can’t remember.
When humans and wildlife come into conflict, our perceptions of how nature “should” be can matter tremendously. Gray wolves were recently delisted from the Endangered Species list, then re-listed in most places—both were controversial decisions—but their numbers are far lower than they were historically. Still, some think there are too many wolves. In the Western U.S., gray wolf conservation efforts often clash with the desires of ranchers and and hunters, who may view higher wolf populations as a threat to livestock or game animals like deer and elk. But some of these hunters and ranchers, Hillard says, “are real conservationists doing amazing work,” and she thinks they should get more attention.
While creating the film, Hillard has tried to capture the complexities of wildlife conservation. It’s not as simple as “They’re bad, they’re good, and this is how we solve it,” Hillard says.
There are different ideas about how conservation efforts should be conducted and which animals should be protected in the first place. The dominant approach to wildlife management in the U.S., Hillard says, is rooted in the idea that there are “good” species that people can use and “bad” species that people don’t like to live with, such as wolves and other predators. “This perspective,” she says, “came over with colonists.” She mentions Little Red Riding Hood and the Big Bad Wolf; the stories we tell about animals can reflect societal attitudes toward them. Many indigenous peoples, meanwhile, have traditionally viewed all species as kin. This “cultural aspect” affects people’s willingness to coexist with species like wolves, which in turn affects our conservation practices.
In this country, very few people are killed by wildlife—about 700 annually, according to one review that counted deaths from bites, wildlife-vehicle collisions, and zoonotic diseases. Car accidents, on the other hand, are more than 60 times more deadly, killing about 43,000 people in the U.S. per year. “We have a certain acceptance of how we die,” Hillard says. “There are a number of things that kill people with much higher percentages [than deaths from wildlife] that we… accept as day-to-day,” but we don’t tend to hear calls to eliminate cars from society, while an animal that harms a human is often given a death sentence. Hillard thinks media in general should be more careful about how they share stories about wildlife, especially negative encounters. If stories focus only on rare but tragic incidents, it can distort perceptions of species and “feed into that doom loop.”
Films, Hillard says, can inspire people “to look at things differently and see things from different perspectives.” Storytelling is also a way of communicating scientific information and encouraging action. Hillard feels that some stories about environmental issues are told in a one-sided, black-and-white way, but the nuances of these problems are important. “Finding those complexities and working through them… and then trying to craft stories around that to share with the public so they can make more informed decisions” is part of the goal of Hillard’s films.
“Coexistence” focuses on well-known, often controversial species like red wolves and mountain lions. “Familiarity and awareness of a species can contribute to interest in protecting them,” Hillard says. Such species are sometimes referred to as charismatic megafauna and can be viewed as ambassadors for conservation or umbrella species whose protection helps other wildlife as well. But Hillard has concerns about the term charismatic megafauna. “It diminishes a species’s value and reduces them to ‘cute’ so you no longer see them as an intrinsic part of an ecosystem,” she says. She believes it’s important to emphasize protection of entire ecosystems, not just specific species within them.
Hillard hopes that her films inspire more awareness of and interest in environmental issues. “There’s a lot of pressure to get it right,” she says. And storytelling can have its own issues when it comes to presenting accurate information. “Information can be left out or shaped in a way to make it more compelling,” Hillard acknowledges. She feels that many wildlife films focus first on scenery and animals, then discuss conservation issues at the end. But “Coexistence” is “very much focused on the issues.” It is expected to be released by early 2025.
“I strive to tell impactful stories in creative ways that are more upbeat in tone,” Hillard says. She believes it’s important for people to be aware of the challenges facing wildlife, but she also wants to inspire hope and the belief that individual actions can matter. “To feel powerless can make you feel hopeless, and there is a lot to be hopeful for,” she says. “But there needs to be a shift in how we view the environment.”
One major problem she sees is our consumerist, materialistic society. “We’re kind of consuming ourselves off the planet,” Hillard says. “How do you change behaviors within a society that’s so hyper-consumptive?”
Films and other forms of storytelling can make scientific information more accessible. “Communicating is that bridge to getting people to care, to understand it, to learn about it,” Hillard says. “Without communication, science studies and research may be siloed in academia.” When we lack accurate and accessible information, we may rely on “‘I heard someone say something about that thing’” rather than science to inform our understanding of issues.
Along with providing accurate information, Hillard wants to encourage “a view of mutualism with other species” and raise questions like “How can we be better neighbors to nonhuman species?”
Ultimately, she wants viewers to recognize that “biodiversity is essential, and it’s not a nice-to-have.”
Hillard at Lands End Lookout in San Francisco. Photo credit Alan Dunkin, provided by Hillard.
Jonny Behrens looks for aquatic macroinvertebrates with Duke Forest Research Tour participants.
“Who would be surprised if I told you that rivers fart?”
Nick Marzolf, Ph.D., went on to explain that streams release greenhouse gases from decaying matter and gas-producing bacteria. This revelation was one of several new facts I learned at the annual Duke Forest Research Tour in December.
“First and foremost,” says Duke Forest Senior Program Coordinator Maggie Heraty, “the Duke Forest is a teaching and research laboratory.” The Office of the Duke Forest hosts an annual Research Tour to showcase research activities and connect to the wider community. “Connecting people to science and nature, and demystifying scientific research, is a key part of our goals here,” Heraty says.
Duke Forest, which consists of over 7,000 acres in Durham, Orange, and Alamance Counties, lies within the Cape Fear and Neuse river basins, two of seventeen river basins in North Carolina. What exactly is a river basin? Heraty quoted a poetic definition from North Carolina Environmental Education:
“A river basin encompasses all the land surface drained by many finger-like streams and creeks flowing downhill into one another and eventually into one river, which forms its artery and backbone. As a bathtub catches all the water that falls within its sides and directs the water out its drain, a river basin sends all the water falling within its surrounding ridges into its system of creeks and streams to gurgle and splash downhill into its river and out to an estuary or the ocean.”
Located within the Cape Fear River Basin, the headwaters of New Hope Creek, which passes through the Korstian Division of Duke Forest, are fed by roughly 33,000 acres of land, over 5,000 of which are in the Duke Forest. Land outside of the Forest is of vital importance, too. Duke Forest is working in partnership with other local conservation organizations through the Triangle Connectivity Collaboration, an initiative to connect natural areas, create wildlife corridors, reduce habitat fragmentation, and protect biodiversity in the Triangle region.
New Hope Creek in the Korstian Division of the Duke Forest.
Dwarf waterdogs
We walked down a short trail by the creek, and the tour split into two groups. Our group walked farther along the stream to meet two herpetologists studying the elusive dwarf waterdog.
Bryan Stuart, Ph.D., Research Curator of Herpetology at the North Carolina Museum of Natural Sciences, and Ron Grunwald, Ph.D., Duke University Senior Lecturer Emeritus, are involved in a study looking for dwarf waterdog salamanders (Necturus punctatus) in New Hope Creek. Dwarf waterdogs are paedomorphic, Stuart said, meaning they retain larval characteristics like external gills and a flat tail throughout their lives. In fact, the genus name Necturus means “tail swimmer” in reference to the species’s flat tail.
According to Stuart, on October 3, 1954, Duke professor and herpetologist Joe Bailey collected a dwarf waterdog in New Hope Creek. It was the first record of the species in Orange County.
The Duke Forest is in the westernmost part of the species’ Piedmont range, though it extends farther west in parts of the sandhills. “To have a dwarf waterdog record in Orange County—that’s almost as interesting as it gets,” Stuart said.
Ron Grunwald and Bryan Stuart discuss dwarf waterdog research at New Hope Creek. Photo provided by The Office of the Duke Forest.
In the late 1960s, Michael A. Fedak, Bailey’s graduate student, did a thesis on dwarf waterdogs in the area. His specimens are still stored in the collections of the North Carolina Museum of Natural Sciences.
No one had studied this population since—until now.
Dwarf waterdogs are very sensitive to pollution and habitat disturbance, Stuart said, on top of the fact that New Hope Creek is already at the edge of the species’s habitat. When Fedak studied them several decades ago, the salamanders were abundant. Are they still?
Stuart, Grunwald, and other researchers want to find out. “The challenge of salamander biology,” Grunwald said, “is that it always happens when it’s freezing.” Surveying salamander populations, he explains, isn’t like watching birds or counting trees. It requires you to go where the salamanders are, and for dwarf waterdog research, that means dark, cold streams on nights when the water temperature is below 55 degrees Fahrenheit.
Researchers bait funnel traps with chicken liver or cat food and set them underwater overnight. Sometimes they catch crayfish. Sometimes they catch nothing. And sometimes they catch exactly what they’re hoping to find: the elusive dwarf waterdog. After all this time, these slippery, nocturnal, chicken-liver-loving salamanders are still here.
Two dwarf waterdogs in a funnel trap before being released back into New Hope Creek.
Though the traps have been successful at capturing some individuals, they will never catch them all, so researchers calculate the recapture rate to estimate the total population. Imagine a bag of rice, Grunwald said. You could count each individual grain, but that would be challenging and time-consuming. Alternatively, you could pull out one grain of rice, color it, and put it back in the bag, then estimate the total number by calculating the probability of pulling out the same colored grain of rice again. In a very small bag, you might draw the same rice grain several times. But the more rice you have, the less likely you are to draw the same grain twice.
To figure out if any of the dwarf waterdogs they catch are recaptures, the researchers mark each individual with a visual implant elastomer, which is “just a fancy way of saying rubber that we can see,” Grunwald said. The material is injected under a salamander’s “armpit” with a small syringe, creating a pattern visible under ultraviolet light. With two colors (fluorescent yellow and red) and four possible injection locations (one behind each leg), there are plenty of distinct combinations. Grunwald showed us a waterdog that had already been marked. Under a UV flashlight, a spot just below its right foreleg glowed yellow.
Captured dwarf waterdogs are injected with a special rubber material that glows under a UV light. Each salamander is marked with a distinct pattern so researchers can recognize it if it’s ever recaptured.
Establishing a recapture rate is essential to predicting the total population in the area. The current recapture rate? Zero. The sample size so far is small—about a dozen individuals—and none of them have been caught twice. That’s an obstacle to statistical analysis of the population, but it’s good news for the salamanders. Every new individual is one more dwarf waterdog survivor in New Hope Creek.
Ron Grunwald with Research Tour participants looking at dwarf waterdogs in bags. Photo provided by The Office of the Duke Forest.
Stream health
Next, at a different spot along the stream, we met Nick Marzolf, Ph.D., a postdoctoral scholar, and Jonny Behrens, a Ph.D. student, to learn more about New Hope Creek itself. Marzolf and Behrens have both been involved with aquaterrestrial biogeochemistry research in the lab of Emily Bernhardt, Ph.D., at Duke University.
Nick Marzolf (right) and Jonny Behrens discuss stream health. Photo provided by The Office of the Duke Forest.
Protecting New Hope Creek requires understanding individual organisms—like dwarf waterdogs—but also temperature, precipitation, oxygen levels, pesticide runoff, and biodiversity overall. When humans get stressed, Behrens said, different organs have different physiological reactions. Similarly, different organisms in a stream play different roles and respond to stress in different ways.
Jonny Behrens and Research Tour participants look at aquatic macroinvertebrate samples. Photo provided by The Office of the Duke Forest.
Behrens passed around vials containing aquatic macroinvertebrates—specimens big enough to see with the naked eye—such as the larvae of mayflies, crane flies, stoneflies, and dragonflies. They are known for being good indicators of stream health because there are many species of macroinvertebrates, and they have different tolerances to stressors like pollution or changes in water temperature.
Aquatic macroinvertebrates can indicate the health of a stream through their species diversity and abundance. Photo provided by The Office of the Duke Forest.
The water downstream of a nearby wastewater treatment plant is much warmer in winter than other waterways in the area, so researchers see more emergent adult midges and caddisflies there than they do here. Aside from temperature, organisms need to adapt to other changing conditions like oxygen levels and storms.
“Rain is really fun to watch in streams,” Behrens said. The water level rises, pulling up organic matter, and sand bars change. You can tell how high the water got in the last storm by looking for accumulated debris on trees along river banks.
Farting rivers and the peanut butter cracker hypothesis
Marzolf studies hydrology, or “how water moves through not only the landscape but also the river itself.”
Nick Marzolf demonstrates a technique to measure gasses in streams using a syringe.
Part of his research involves measuring gases in water. Streams, like cars and cows and people, release greenhouse gases, including carbon dioxide and methane. In fact, Marzolf and colleagues hypothesize that New Hope Creek contributes more CO2 to the atmosphere per unit area than anywhere else in the Duke Forest.
Decaying matter produces CO2, but that isn’t the only source of greenhouse gasses in the creek. Microscopic organisms, like methane-producing bacteria, produce gases as well.
The “peanut butter cracker hypothesis,” Marzolf said, compares organic matter such as leaves to a cracker, while the “peanut butter,” which makes the cracker more palatable, is the microbes. Scrumptious.
Disturbing the sediment at the bottom of New Hope Creek causes bubbles to rise to the surface due to the metabolic activities of gas-producing bacteria.
Marzolf turned to Behrens. “Do you want to walk around and see if you can stir up some methane bubbles?” Behrens waded into the stream, freeing bubbles from the pressure of the overlying water keeping them in leaf mats. We watched the bubbles rise to the surface, evidence of the activities of organisms too small to see.
Behrens walks around in New Hope Creek to stir up gas bubbles from aquatic bacteria.
Restoring a stream to protect its pigtoe
Finally, Sara Childs, Executive Director of the Duke Forest, discussed stream restoration projects. Though structures in the Duke Forest like remnants of old mills and dams can alter and damage ecosystems, they can also have historical and cultural significance. Duke Forest prioritizes restoration projects that have meaningful ecological, teaching, and research benefits while honoring the history of the land.
For instance, the Patterson Mill Dam was built in the late 1700s and probably remained in use for about 100 years. The stream has already adapted to the structure’s presence, and there isn’t necessarily ongoing degradation because of it. Duke Forest restoration projects, Childs said, don’t revolve around very old structures like the Patterson Mill Dam. Instead, they are planning to remove two more recent structures that are actively eroding banks, threatening wildlife habitat, and creating impounded, oxygen-poor areas in the stream.
One of the structures they are hoping to remove is a concrete bridge that’s endangering a threatened freshwater mussel species called the Atlantic pigtoe (Fusconaia masoni). Freshwater mussels, according to Childs, require a fish species to host the developing mussel larvae on their gills, and the Atlantic pigtoe favors the creek chub (Semotilus atromaculatus). The concrete bridge forms a barrier between the pigtoe and the chub, but removing it could reunite them.
Before starting construction, they will relocate as many mussels as possible to keep them out of harm’s way.
New Hope Creek, home to waterdogs and pigtoe and farting microbes, is precious to humans as well. Heraty describes it as “a really spectacular and beautiful waterway that we are lucky to have right in our backyards here in Durham.”
Note: Each year, we partner with Dr. Amy Sheck’s students at the North Carolina School of Science and Math to profile some unsung heroes of the Duke research community. This is the of fourth eight posts.
In the intricate world of biology, where the mysteries of animal behavior unfold, Dr. Jesse Granger emerges as a passionate and curious scientist with a Ph.D. in biology and a penchant for unraveling the secrets of how animals navigate their surroundings.
Her journey began in high school when she posed a question to her biology teacher about the effect of eye color on night vision. Unable to find an answer, they embarked together on a series of experiments, igniting a passion that would shape Granger’s future in science.
Jesse Granger in her lab at Duke
Granger’s educational journey was marked by an honors thesis at the College of William & Mary that delved into the potential of diatoms, single-cell algae known for their efficiency in capturing light, to enhance solar panel efficiency. This early exploration of light structures paved the way for a deeper curiosity about electricity and magnetism, leading to her current research on how animals perceive and use the electromagnetic spectrum.
Currently, Granger is involved in projects that explore the dynamics of animal group navigation. She is investigating how animals travel in groups to find food, with collective movement and decision-making.
Among her countless research endeavors, one project holds a special place in Granger’s heart. Her study involved creating a computational model to explore the dynamics of group travel among animals. She found that agents, a computational entity mimicking the behavior of an animal, are way better at getting where they are going as part of a group than agents who are traveling alone.
Granger’s daily routine in the Sönke Johnson Lab revolves around computational work. While it may not seem like a riveting adventure to an outsider, to her, the glow of computer screens harbors the key to unlocking the secrets of animal behavior. Coding becomes her toolkit, enabling her to analyze data, develop models, and embark on simulations that mimic the complexities of the natural world.
Granger’s expertise in coding extends to using R for data wrangling and NetLogo, an agent-based modeling program, for simulations. She describes the simulation process as akin to creating a miniature world where coded animals follow specific rules, giving rise to emergent properties and valuable insights into their behavior. This skill set seamlessly intertwined with her favorite project, where the exploration of group dynamics and navigation unfolded within the intricate landscapes of her simulated miniature world.
In the tapestry of scientific exploration, Jesse Granger emerges as a weaver of knowledge, blending biology, physics, and computation to unravel the mysteries of animal navigation. Her journey, marked by curiosity and innovation, not only enriches our understanding of the natural world but also inspires the next generation of scientists to embark on their unique scientific odysseys.
Guest Post by Mansi Malhotra, North Carolina School of Science and Math, Class of 2025.
